seth

Class dbSNPRecognizer

java.lang.Object

seth.dbSNPRecognizer

public class dbSNPRecognizer
extends Object

Detect dnSNP mentions in text (e.g., rs2345)

Author:

Philippe Thomas

Constructor Summary

Constructors

Constructor and Description
dbSNPRecognizer()

Method Summary

Modifier and Type	Method and Description
List<MutationMention>	extractMutations(String text) FInd dbSNP mentions in a text

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

dbSNPRecognizer

public dbSNPRecognizer()

Method Detail

extractMutations

public List<MutationMention> extractMutations(String text)

FInd dbSNP mentions in a text

Parameters:

text - Text to perform Named Entity Recognition

Returns:

A list of dbSNP mentions found in the provided text