Uses of Class
edu.uchsc.ccp.nlp.ei.mutation.Mutation

Packages that use Mutation

Package	Description
edu.uchsc.ccp.nlp.ei.mutation	Contains the modified MutationFinder code Adaptations include the recognition of ambiguous mutations, non-synonymous mutations, and DNA mutations For the original code we refer to http://mutationfinder.sourceforge.net/

Uses of Mutation in edu.uchsc.ccp.nlp.ei.mutation

Subclasses of Mutation in edu.uchsc.ccp.nlp.ei.mutation

Modifier and Type	Class and Description
class	PointMutation A class for storing information about protein point mutations

Methods in edu.uchsc.ccp.nlp.ei.mutation that return types with arguments of type Mutation

Modifier and Type	Method and Description
Map<Mutation,Set<int[]>>	MutationFinder.extractMutations(String rawText) Extract point mutations mentions from raw_text and return them in a map.
abstract Map<Mutation,Set<int[]>>	MutationExtractor.extractMutations(String rawText) Extract point mutations mentions from raw_text and return them in a map.