Uses of Class
de.hu.berlin.wbi.objects.UniprotFeature

Packages that use UniprotFeature

Package	Description
de.hu.berlin.wbi.objects	Package with the main data objects.

Uses of UniprotFeature in de.hu.berlin.wbi.objects

Methods in de.hu.berlin.wbi.objects that return UniprotFeature

Modifier and Type	Method and Description
UniprotFeature	dbSNPNormalized.getFeature()
UniprotFeature	TranscriptNormalized.getFeature()

Methods in de.hu.berlin.wbi.objects that return types with arguments of type UniprotFeature

Modifier and Type	Method and Description
static List<UniprotFeature>	UniprotFeature.getFeatures(int geneID) Returns all UniProt features for one specific Entrez-Gene Identifier

Method parameters in de.hu.berlin.wbi.objects with type arguments of type UniprotFeature

Modifier and Type	Method and Description
void	MutationMention.normalizeSequences(Set<Transcript> candidateTranscripts, List<UniprotFeature> features, boolean append) This method evaluates if some of the Transcript provided in candidateTranscripts equals the text-mined MutationMention.
void	MutationMention.normalizeSNP(List<dbSNP> candidates, List<UniprotFeature> features, boolean append) This method evaluates if some of the dbSNP provided in candidates actually equals the text-mined MutationMention

Constructors in de.hu.berlin.wbi.objects with parameters of type UniprotFeature

Constructor and Description
dbSNPNormalized(dbSNP dbsnp, EnumSet<MatchOptions> matchType, UniprotFeature feature)