de.hu.berlin.wbi.objects

Enum MutationMention.Tool

java.lang.Object

java.lang.Enum<MutationMention.Tool>

de.hu.berlin.wbi.objects.MutationMention.Tool

All Implemented Interfaces:

Serializable, Comparable<MutationMention.Tool>

Enclosing class:

MutationMention

public static enum MutationMention.Tool
extends Enum<MutationMention.Tool>

Enumeration of all named entity recognition components

Enum Constant Summary

Enum Constants

Enum Constant and Description
CNVETH Mutations found by the CNVRecognizer class
DBSNP Mutations detected by the dbSNP recognition component
MUTATIONFINDER Mutations found by MutationFinder
REGEX Mutations found by our regular expressions for deprecated nomenclatures
SETH Mutations found by SETH-NER (Backus Naur grammar)
UNKNOWN Fallack for future tools

Method Summary

Modifier and Type	Method and Description
static MutationMention.Tool	valueOf(String name) Returns the enum constant of this type with the specified name.
static MutationMention.Tool[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

MUTATIONFINDER

public static final MutationMention.Tool MUTATIONFINDER

Mutations found by MutationFinder

SETH

public static final MutationMention.Tool SETH

Mutations found by SETH-NER (Backus Naur grammar)

REGEX

public static final MutationMention.Tool REGEX

Mutations found by our regular expressions for deprecated nomenclatures

DBSNP

public static final MutationMention.Tool DBSNP

Mutations detected by the dbSNP recognition component

CNVETH

public static final MutationMention.Tool CNVETH

Mutations found by the CNVRecognizer class

UNKNOWN

public static final MutationMention.Tool UNKNOWN

Fallack for future tools

Method Detail

values

public static MutationMention.Tool[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (MutationMention.Tool c : MutationMention.Tool.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static MutationMention.Tool valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null